RIB00109 annotation version: RAP release 2
original web site: RAP-DB

Os_RAPDB_Locus

Date last modified 2010-12-20
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Os_RAPDB_Locus
description
synonym
gene type
species
gene region
category
position_IRGSP_build3
has_InterPro
mappingTo_MSU
Attribution update
  Os01g0100100
RabGAP/TBC domain containing protein.
-
protein_coding_gene
Oryza sativa
chr1_+_1903-9816
III : InterPro domain-containing protein
Chr1
Rab-GAP/TBC domain
LOC_Os01g01010
http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/build4?class=locus_id;name=Os01g0100100 2010-12-20
  Os01g0100200
Conserved hypothetical protein.
-
protein_coding_gene
Oryza sativa
chr1_+_10198-11435
IV : Conserved hypothetical protein
Chr1
-
LOC_Os01g01019
http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/build4?class=locus_id;name=Os01g0100200 2010-12-20
  Os01g0100300 - -
predicted_gene
Oryza sativa
chr1_-_10372-11217
-
Chr1
- - http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/build4?class=locus_id;name=Os01g0100300 2010-12-20
  Os01g0100400 - - - - - -
Chr1
- - http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/IRGSP30?class=locus_id;name=Os01g0100400 2010-11-26
  Os01g0100500
Similar to Pectinesterase-like protein.
-
protein_coding_gene
Oryza sativa
chr1_+_11648-19322
II : Similar to known protein
Chr1
Multicopper oxidase, type 1
Multicopper oxidase, type 2
Multicopper oxidase, type 3
Cupredoxin
LOC_Os01g01040
http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/build4?class=locus_id;name=Os01g0100500 2010-12-20
  Os01g0100600
Single-stranded nucleic acid binding R3H domain containing protein.
-
protein_coding_gene
Oryza sativa
chr1_+_21841-25894
III : InterPro domain-containing protein
Chr1
Single-stranded nucleic acid binding R3H
LOC_Os01g01050
http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/build4?class=locus_id;name=Os01g0100600 2010-12-20
  Os01g0100700
Similar to 40S ribosomal protein S5-1.
-
protein_coding_gene
Oryza sativa
chr1_+_26138-27644
II : Similar to known protein
Chr1
Ribosomal protein S7
Ribosomal protein S7, eukaryotic/archaeal
LOC_Os01g01060
http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/build4?class=locus_id;name=Os01g0100700 2010-12-20
  Os01g0100800
Protein of unknown function DUF1664 family protein.
-
protein_coding_gene
Oryza sativa
chr1_+_28818-33453
III : InterPro domain-containing protein
Chr1
Protein of unknown function DUF1664
LOC_Os01g01070
http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/build4?class=locus_id;name=Os01g0100800 2010-12-20
  Os01g0100900
Pyridoxal-dependent decarboxylase family protein.
-
protein_coding_gene
Oryza sativa
chr1_+_34601-40178
III : InterPro domain-containing protein
Chr1
Pyridoxal phosphate-dependent decarboxylase
LOC_Os01g01080
http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/build4?class=locus_id;name=Os01g0100900 2010-12-20
  Os01g0101000 - - - - - -
Chr1
- - http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/IRGSP30?class=locus_id;name=Os01g0101000 2010-11-26
  Os01g0101100 - -
predicted_gene
Oryza sativa
chr1_+_56157-56972
-
Chr1
-
LOC_Os01g01110
http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/build4?class=locus_id;name=Os01g0101100 2010-12-20
  Os01g0101200
2,3-diketo-5-methylthio-1-phosphopentane phosphatase domain containing protein.
-
protein_coding_gene
Oryza sativa
chr1_+_61023-64537
III : InterPro domain-containing protein
Chr1
Haloacid dehalogenase-like hydrolase
2,3-diketo-5-methylthio-1-phosphopentane phosphatase
LOC_Os01g01120
http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/build4?class=locus_id;name=Os01g0101200 2010-12-20
  Os01g0101300
Conserved hypothetical protein.
-
protein_coding_gene
Oryza sativa
chr1_-_62670-64950
IV : Conserved hypothetical protein
Chr1
-
LOC_Os01g01130
http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/build4?class=locus_id;name=Os01g0101300 2010-12-20
  Os01g0101400 - - - - - -
Chr1
- - http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/IRGSP30?class=locus_id;name=Os01g0101400 2010-11-26
  Os01g0101500 - -
predicted_gene
Oryza sativa
chr1_+_68675-69131
-
Chr1
-
LOC_Os01g01140
http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/build4?class=locus_id;name=Os01g0101500 2010-12-20
  Os01g0101550 - -
predicted_gene
Oryza sativa
chr1_-_69158-69792
- - - - http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/build4?class=locus_id;name=Os01g0101550 2010-12-20
  Os01g0101600
RNA-binding region RNP-1 (RNA recognition motif) domain containing protein.
-
protein_coding_gene
Oryza sativa
chr1_+_71785-78716
III : InterPro domain-containing protein
Chr1
Nucleotide-binding, alpha-beta plait
RNA recognition motif domain
Filamin/ABP280 repeat
LOC_Os01g01150
http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/build4?class=locus_id;name=Os01g0101600 2010-12-20
  Os01g0101700
Heat shock protein DnaJ, N-terminal domain containing protein.
-
protein_coding_gene
Oryza sativa
chr1_+_81478-83168
III : InterPro domain-containing protein
Chr1
Heat shock protein DnaJ, N-terminal
LOC_Os01g01160
http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/build4?class=locus_id;name=Os01g0101700 2010-12-20
  Os01g0101800
Conserved hypothetical protein.
-
protein_coding_gene
Oryza sativa
chr1_+_84337-87844
IV : Conserved hypothetical protein
Chr1
-
LOC_Os01g01170
http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/build4?class=locus_id;name=Os01g0101800 2010-12-20
  Os01g0101900 - -
predicted_gene
Oryza sativa
chr1_-_87986-88204
-
Chr1
-
LOC_Os01g01180
http://rapdb.dna.affrc.go.jp/viewer/gbrowse_details/build4?class=locus_id;name=Os01g0101900 2010-12-20
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