Os_MSU_Locus

Date last modified 2010-12-10
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Os_MSU_Locus
description
synonym
gene type
species
gene region
has_InterPro
has_Pfam
Attribution update
  LOC_Os01g01010
TBC domain containing protein, expressed
-
protein_coding_gene
Oryza sativa
chr1_+_1903-9817
Rab-GAP/TBC domain
TBC
http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01010 2010-12-10
  LOC_Os01g01019
expressed protein
-
protein_coding_gene
Oryza sativa
chr1_+_10218-11435
- - http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01019 2010-12-10
  LOC_Os01g01030
monocopper oxidase, putative, expressed
-
protein_coding_gene
Oryza sativa
chr1_+_11648-14915
Multicopper oxidase, type 3
Multicopper oxidase, type 1
Multicopper oxidase, type 2
Cupredoxin
Cu-oxidase
Cu-oxidase_3
Cu-oxidase_2
http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01030 2010-12-10
  LOC_Os01g01040
expressed protein
-
protein_coding_gene
Oryza sativa
chr1_+_15292-19323
- - http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01040 2010-12-10
  LOC_Os01g01050
R3H domain containing protein, expressed
-
protein_coding_gene
Oryza sativa
chr1_+_21841-25971
Single-stranded nucleic acid binding R3H
R3H
http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01050 2010-12-10
  LOC_Os01g01060
40S ribosomal protein S5, putative, expressed
-
protein_coding_gene
Oryza sativa
chr1_+_26136-27651
Ribosomal protein S7
Ribosomal protein S7, eukaryotic/archaeal
Ribosomal_S7
http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01060 2010-12-10
  LOC_Os01g01070
expressed protein
-
protein_coding_gene
Oryza sativa
chr1_+_28818-33493
Protein of unknown function DUF1664
NAD(P)-binding domain
DUF1664
http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01070 2010-12-10
  LOC_Os01g01080
decarboxylase, putative, expressed
-
protein_coding_gene
Oryza sativa
chr1_+_34581-40180
Pyridoxal phosphate-dependent decarboxylase
Pyridoxal phosphate-dependent transferase, major domain
Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Pyridoxal_deC
http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01080 2010-12-10
  LOC_Os01g01090
retrotransposon protein, putative, unclassified
-
protein_coding_gene
Oryza sativa
chr1_+_43595-46526
Transposase (putative), gypsy type
Transposase_28
http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01090 2010-12-10
  LOC_Os01g01100
retrotransposon protein, putative, Ty3-gypsy subclass
-
protein_coding_gene
Oryza sativa
chr1_-_46856-52412
Retrotransposon gag protein
Reverse transcriptase
Integrase, catalytic core
Ribonuclease H-like
rve
Retrotrans_gag
RVT_1
http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01100 2010-12-10
  LOC_Os01g01110
conserved hypothetical protein
-
protein_coding_gene
Oryza sativa
chr1_+_54914-56972
Protein kinase, catalytic domain
Serine/threonine-protein kinase-like domain
Protein kinase-like domain
Pkinase
http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01110 2010-12-10
  LOC_Os01g01115
pentatricopeptide, putative
-
protein_coding_gene
Oryza sativa
chr1_+_57658-60090
Pentatricopeptide repeat
PPR
http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01115 2010-12-10
  LOC_Os01g01120
enolase-phosphatase E1, putative, expressed
-
protein_coding_gene
Oryza sativa
chr1_+_61059-62576
Haloacid dehalogenase-like hydrolase
2,3-diketo-5-methylthio-1-phosphopentane phosphatase
Hydrolase
http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01120 2010-12-10
  LOC_Os01g01130
snurportin-1, putative, expressed
-
protein_coding_gene
Oryza sativa
chr1_-_62244-65302
- - http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01130 2010-12-10
  LOC_Os01g01140
hypothetical protein
-
protein_coding_gene
Oryza sativa
chr1_+_68675-69131
- - http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01140 2010-12-10
  LOC_Os01g01150
RNA recognition motif, putative, expressed
-
protein_coding_gene
Oryza sativa
chr1_+_71775-78938
Filamin/ABP280 repeat
RNA recognition motif domain
Immunoglobulin E-set
Immunoglobulin-like fold
Nucleotide-binding, alpha-beta plait
RRM_1
Filamin
http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01150 2010-12-10
  LOC_Os01g01160
heat shock protein DnaJ, putative, expressed
-
protein_coding_gene
Oryza sativa
chr1_+_81428-83302
Heat shock protein DnaJ, N-terminal
Molecular chaperone, heat shock protein, Hsp40, DnaJ
DnaJ
http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01160 2010-12-10
  LOC_Os01g01170
expressed protein
-
protein_coding_gene
Oryza sativa
chr1_+_84337-87844
- - http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01170 2010-12-10
  LOC_Os01g01180
expressed protein
-
protein_coding_gene
Oryza sativa
chr1_-_87986-88204
- - http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01180 2010-12-10
  LOC_Os01g01190
phosphoesterase family protein, putative, expressed
-
protein_coding_gene
Oryza sativa
chr1_-_88653-90521
Phosphoesterase
Alkaline-phosphatase-like, core domain
Phosphoesterase
http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?orf=LOC_Os01g01190 2010-12-10
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